kareina: steatite vessel (Durham)
One of the people over on the Women in Academia Support Network (on FB) asked "Hi, everyone. Could I ask you all about your note-taking [ETA: and organisational] system for your academic reading? [snip]"

Having taken the time to give her a summary of my approach (which she thanked me for as it sounded useful), I thought I would clean it up and post it here, too.

I use Scrivener, with one card for every journal article, book, etc. I have ever downloaded, read, saw a citation for in something else that I might want to take a look at, etc.

The card title is the citation as it would appear in line (Jones 2019),

The card itself starts with the full citation details.

Followed by a note to myself about why this card is here e.g. "Downloaded 2019-10-05 after seeing a scopus alert for it" or, "cited by ___, who said ___". or "Emailed to me 2016-05-04 by ____, who said "____". (In the latter two cases there is a link to the card for that person.)

Then comes a section for Topics: whee I have scrivener links to cards for every topic I think might be related to this card. Those topic cards have bullet point lists which links back to every card that relates to this topic, plus a parenthetical note that says what the article is about (specifically how it relates to this topic, so it isn't always the same parenthetical note for the same journal article on every topic card, though it can be). When I add a new topic card I also add a note saying when it was added and the fact that there may be more documents (whose cards were created before this date) that could go here.

Below topics I have a "places I cite this" list (if any), with links to the document in which I cited it. I also have a card called "things I have cited", with bullet point lists linking back to the literature cards.

Under that I finally have my reading notes, which start with a sub heading "Reading notes 2019-10-27:" followed by the notes. If the article cites another article I link to a card for that article (creating it if needed) right in the notes (and on that other card I add under the "why I have this section" a note with a link back to who cited it and what they said. The reading notes are in sedimentary order, with the most recent set of notes first. Sometimes, if I read a whole book there will be sub-cards for each chapter and its notes (and links and cross references)

To keep the cross-referenced/link everything to everything else theme going, I also have a card for the record of my reading, which is a bullet point list with date, link to the article, and which page numbers (or the word "all" if I read the whole thing), so I can always look there to see if I finished reading something or not.

If I have a pdf for the document I import it into scrivener and put it under the card for its notes (and both the notes card and the pdf will have the same author-date formatted name).

Does this all take lots of time to set up? Yes, but I have many times been grateful that my past self put this much effort in, as I had forgotten reading it till I looked at the notes and links. It is also great when I need need a citation for a given topic--rather than trusting my memory, I can just go look at the topic card and see if anything there is appropriate.

If anyone uses any tips or tricks that would be compatible with this approach, but I didn't mention it above, please to leave a note in the comments to tell me about it.
kareina: steatite vessel (2nd PhD)
When I first started my first PhD the university provided EndNote free to all students, and I was delighted not to need to worry about doing the formatting for citations myself. At the time I thought it enough to just download the citation details for each paper as I got them, adding a "label" that matched the name of the folder I had downloaded it to, so I could find them later. Over time I realized that it would make sense to add a note telling my future self when and why I had downloaded each paper.

When I started my second PhD and also started using Scrivener I exported all of the citations I had in endnote and made scrivener cards for each, so that I could link to the card if I cited them in something I was writing. I also started taking reading notes directly on the cards (I was really bad about taking notes before, since if I did they would wind up being hard to find later, so I wouldn't look at them anyway, so I didn't see the point).

The longer I use Scrivener the more and more organized I am becoming. Therefore I thought I would record my current work flow for adding a new card for a paper:

1) find out about a paper. (the three most common reasons are A) seeing a scopus alert mentioning it from a previous search I had set up, B) Doing a new database search on a specific topic, C) seeing it cited in a paper I am reading.

2a) If the source is scopus (or any other on line source with the option to export the citation information export it and import the data into EndNote. Add a "label" for the primary topic, add "research notes" stating today's date and why this paper is interesting enough to make note of (this will include mentioning how I found out about it). Copy-paste the "preview" of the citation, including the research notes onto a new Scrivener card.

2b) If the source is a paper I am reading copy-paste (or re-type if the paper is so old the pdf doesn't have copyable text) the relavant quote into my reading notes for today, then make a new scrivener card, copy the citation information from the reference list of the articles and, in the notes about why I am adding the card, copy the citation quote, and add a link to the paper containing the quote. Then, add a link on the first card to the new citation. At this point either leave the new citation's card with a note that says "card added, but not downloaded", and give it a status "add to endnote" and resume reading the first article, or go looking for the article on line, download it, add it to endnote.

3) once the new paper has a card give it a list of topics, linking each one to a topic card of the same name. On each topic card include a link back to the card for the new article. Add a parenthetical note next to the link. For example my topic card "3D images" has the following list:

* Badiu, et al 2015 (pottery profiles)
* Williams et al 2019 (poster Roman cattle skulls/target practice) (see also our Email exchange on the topic)
* Williams et al 2019b (paper Roman cattle skulls) (see also our Email exchange on the topic)
* Frangione et al 2019 (automated scaling techniques-photogrammetric micro measurements)

Were each author/date is a link to that card, and the "see also our email exchange" is a link to that card. A single paper may have quite a few topics.

This is all a fair bit of extra work, but my future self will thank me for it. Indeed, I am already thanking my past self for having done this--if I am writing a grant proposal and need a citation for why a specific technique is perfect for the proposed project I need only look at the topic card for that technique, click on the links to see which of the papers that address that topic is the best one to make my case.

However, since at first I wasn't using topic cards, I am finding that as I work on my literature review and start papers I am having to go back and add topics to papers I have had for a longer time. I also have a topic card for "papers I have cited", which has come in handy when writing new papers, as I can quickly go look "what did I say last time I cited this paper?"

I suspect that my work flow will continue to evolve as I get even better at keeping good records. However, even at the first stages of using Scrivener it was already so much better than anything I had tried before. Sometimes I wonder how I managed to do research without these tools.
kareina: steatite vessel (Durham)
I am in Durham just now, after a fun-filled and busy couple of weeks since last I posted, the highlights of which included both the visit from Khevron and Lareena, the trip to Uma’s XXV Hostdansen & Norrskensbard contest.

On the way here I visited Stephanie in Edinburgh on Tuesday evening and on Wednesday visited a couple of Archaeologists based in Glasgow who do work on steatite from the Shetlands and Norway. Then I hurried straight south as today and yesterday were the only days that one of my advisors was available before he goes on parent leave. So I have been spending my time here in the XRD lab, finally looking at the results of the analyses we did when I was here last summer, and in the process learning a fair bit about how it all works. Today I took a long tea break to meet with Karen, my other supervisor and two of her new PhD students. It was a great meeting and I really enjoyed visiting with them. In the process we even came up with a fun sounding project idea for my first post-doc as an archaeologist. I just need to finish this degree first. It would involve experimental archaeology, steatite, trace-element leaching, health, and bones…
kareina: steatite vessel (2nd PhD)
Many of my work hours on the second PhD project have been spent delving in the database of the Swedish Historical Museum. I had been sent a link to a database search showing the 300-some odd steatite objects in their collection when I first started my project, and I have been slowly working my way through that list, creating cards in Scrivner for the various objects (plus photos, when they are available), and sorting the cards into folders for each location, and importing the locations from the database into Google earth, so I know where the objects are located.

The new icon, which I plan to use for posts related to my Durham uni work, comes from one of the finds from Lappland It is a "täljsten kärl", or soapstone vessel, which was part of a collection of objects sold to the museum in 1947, and supposedly found in Nautasjaure (today Nautijaur), Jokkmokk parish, Lappland.

My plan for this part of the project is to have a thesis section summarizing all of the Swedish soapstone objects from the collection, and then focus in on the Viking age objects that I will (I hope) be analyzing.

Parallell with this I need to get my hands on either published compositions or actual bits of soapstone from all of the outcrops which were or could have been used as quarries back then and analyze them to see what their trace element compositions are, and how to tell one quarry from another based on composition, in order to have a hope of being able to determine where the various objects came from before they were transformed from a bit of rock in the ground to a useful object.

From where I sit right now, this project looks like it will be fun and fascinating, but I am somewhat concerned about getting it all accomplished before my funding runs out in four years, given that I still have to work half time, and would like to have a life, too.
kareina: (Default)
I am just back from a quick trip to Umeå, where I met with the head of their Archaeology department and some of his students and colleagues. I sent them an email in December to introduce myself, since they are the most local archaeology department, and he invited me to drop by some time, so I did.

I arrived on Thursday evening, just on time to head to the lokal, the basement apartment that the Uma group rents (cheap) for their meetings and to store the group stuff for their regular Thursday gathering. Had a good time hanging out there with folk, and helped my minion with fitting on his costume in progress, before I followed him back to his place to do yoga (together, it is so nice to have company for yoga!) and get some sleep. This morning he and I hung out and cooked breakfast together and then his girlfriend L. arrived for a short visit before it was time for me to head over to the Archaeology Department. It was really good to see everyone, I wish that it didn't take so long to travel between places (three hours by car, or four by bus to get to Umeå from here--I took the bus, even though it is longer, because one can relax, and it costs about the same as petrol would have if only one is going).

The Archaeologists showed me their NIR equipment and some of their results. That is a technique I knew nothing about, and find it fascinating. They were able to distinguish a couple of different types of quartzite and a couple of different types of quartz from one of their finds. He suggests that if I am interested I could use their NIR technique on my soapstone before doing spot analyses, and they are interested in using my laser lab, so it was a good visit. I especially enjoyed the photos his student, Claudia, showed me of her work studying the walls at Carcasone. There is just so much really cool and fascinating stuff to do in the intersection between archaeology and geology! I am so delighted that I decided to start down this path. (Do feel free to remind me of this later, when/if I hit difficult or stressfull parts of the project.)

He also made a comment that has inspired me for a possible experimental archaeology component to my research. While we were discussing the differences between the two quartzites in their study above he commented that it could be due to changes as a result of use, rather than differences in the original rock--that if one heats a stone in a hearth every day, some changes are bound to happen. Therefore it could be fun to get my hands on some soapstone and make a vessel or baking stone, analyze it when it is new, then use it for cooking or baking (I love to bake, which is why latter crossed my mind) in a fire on a regular basis, keeping careful records of when, how long, etc., and then periodically re-analyze it, to see what, if any, changes wind up being visible, and if any, how long it took before they were noticeable. However, given how the small analysis chamber of the laser is, a baking stone wouldn't lend itself well to this idea, unless we were only using the NIR for its analysis...

After my meeting I met with friend Aron, who used to live in Luleå and sung in the student choir with me, and he joined me for waiting for the bus (I had about an hour with him), which was really nice.

Looking forward to my visit to Durham only one more week. Now I just need to remember to take with me things that I forgot to bring with me to Umeå (like the extra battery for recharging the phone while traveling).
kareina: (BSE garnet)
I am making tiny progress on preparing my application for a 2nd PhD through the University of Durham. Today I actually started filling in the on-line application form, so that the basics are ready when I finally have my project proposal and budget ready to attach. I have exchanged a number of letters with my potential advisor, who has written to various people in her network and forwarded me their replies. She sent me a copy of a very interesting PhD thesis by one of her colleagues who studied "war booty" from the Roman Iron Age, using LA-ICP-MS to study the weapons that had been deposited in a heap in a lake. What really amazed me about his thesis is that he did his data processing by hand, in a spreadsheet, since his department didn't have a licence for a program like iolite, which is what I use for my LA-ICP-MS data processing.

I also looked at the web page for the Swedish student financial aid people. It looks like it is possible for me to get a stipend from them to study in the UK, but only until I am 57, so I had better do it now and not wait. The stipend isn't huge, but it will make a difference in paying for lab work and possibly even getting to Durham now and then to actually see my advisor in person.

The only reason I don't already have a project proposal is that there are too many cool project ideas that we have been tossing back and forth at one another. The good news is that I will enjoy whatever project we settle on, the bad news is that I can only pick one. garnets? glass? soapstone? beads? cooking toys? Something Viking Age, anyway, and using Swedish artifacts. That much we know.

Some of you who have been reading this since I first got hired to run the LA-ICP-MS lab might remember that while waiting for the delivery of the machines I had contacted some archaeologists in Uppsala wondering if they might be interested in doing some collaborative research on some garnet-bearing sword hilts etc. It turns out that my potential advisor knows them, and is good friends with one of them.

The more letters we exchange, the more convinced I am that this is a chance of a lifetime, and I should go for it.

And, to make things even better, AMT was fun tonight, as always! I love the gymnastics training. Never mind that I am the worst kid in the class, I am showing improvement every week, and enjoying it.

I stopped by an open house today--one of the houses in our neighbourhood is for sale--the third since we bought our place (if you count ours). That house is slightly older than ours (1964 vs '66), not as big, weirdly laid out (who sets it up so that one has to go through the kitchen into and then through a bedroom to get to the garage and laundry area? Why did they take off the back door? They also have much, much, much less land than we have--just a small yard suitable for little kids to play in. I am so happy we got the house we did. The highlight of the house was a wall mounted can-opener in the kitchen, that, from the look of it, must have been put up when the house was brand new. but probably hasn't been used in years, since most "canned" food in Sweden comes in cardboard boxes, and those few items that are in metal cans have a self-opening lid.

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